Package index
-
TFIDF()
- TFIDF
-
addDoublets()
- addDoublets
-
aggregateFeatures()
- aggregateFeatures
-
amulet()
- amulet
-
amuletFromCounts()
- amuletFromCounts
-
clamulet()
- clamulet
-
clusterStickiness()
- clusterStickiness
-
computeDoubletDensity()
- Compute the density of simulated doublets
-
createDoublets()
- createDoublets
-
cxds2()
- cxds2
-
directDblClassification()
- directClassification
-
doubletPairwiseEnrichment()
- doubletPairwiseEnrichment
-
doubletThresholding()
- doubletThresholding
-
fastcluster()
- fastcluster
-
findDoubletClusters()
- Detect doublet clusters
-
getArtificialDoublets()
- getArtificialDoublets
-
getCellPairs()
- getCellPairs
-
getExpectedDoublets()
- getExpectedDoublets
-
getFragmentOverlaps()
- getFragmentOverlaps
-
mockDoubletSCE()
- mockDoubletSCE
-
plotDoubletMap()
- plotDoubletMap
-
plotThresholds()
- plotThresholds
-
propHomotypic()
- propHomotypic
-
recoverDoublets()
- Recover intra-sample doublets
-
scDblFinder()
- scDblFinder
-
selFeatures()
- selFeatures