Function reference • scDblFinder

All functions

TFIDF(): TFIDF

addDoublets(): addDoublets

aggregateFeatures(): aggregateFeatures

amulet(): amulet

amuletFromCounts(): amuletFromCounts

clamulet(): clamulet

clusterStickiness(): clusterStickiness

computeDoubletDensity(): Compute the density of simulated doublets

createDoublets(): createDoublets

cxds2(): cxds2

directDblClassification(): directClassification

doubletPairwiseEnrichment(): doubletPairwiseEnrichment

doubletThresholding(): doubletThresholding

fastcluster(): fastcluster

findDoubletClusters(): Detect doublet clusters

getArtificialDoublets(): getArtificialDoublets

getCellPairs(): getCellPairs

getExpectedDoublets(): getExpectedDoublets

getFragmentOverlaps(): getFragmentOverlaps

mockDoubletSCE(): mockDoubletSCE

plotDoubletMap(): plotDoubletMap

plotThresholds(): plotThresholds

propHomotypic(): propHomotypic

recoverDoublets(): Recover intra-sample doublets

scDblFinder(): scDblFinder

selFeatures(): selFeatures